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OpenEye Scientific Software Inc molecular docking simulations fred
Molecular Docking Simulations Fred, supplied by OpenEye Scientific Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/docking+simulation+fred/molecular+docking+package+fred/pmc08009527-63-1-16
Average 90 stars, based on 1 article reviews
molecular docking simulations fred - by Bioz Stars, 2026-10
90/100 stars

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Binding Assay:

Article Title: Discovery of a nonsteroidal brassinolide-like compound, NSBR1
Article Snippet: .. In order to compare the interactions between receptor proteins and ligand molecules, BL and 8, respectively, we performed a docking simulation using FRED (OpenEye) and calculated the binding free energy using MD/MM-PBSA.32) As shown in Fig. 6, hydrogen bonds (HBs) between OHs of the BL A-ring and SERK1 were detected (left figure of Fig. 6), while no hydrogen bond (HB) was formulated for the antagonistic compound 8 (middle figure of Fig. 6). ..

Article Title: Discovery of a nonsteroidal brassinolide-like compound, NSBR1
Article Snippet: .. Red arrows indicate acceptor/donors. (Color online) In order to compare the interactions between receptor proteins and ligand molecules, BL and 8 , respectively, we performed a docking simulation using FRED (OpenEye) and calculated the binding free energy using MD/MM-PBSA. ..



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